› 5tu7

X-ray diffraction
3.34Å resolution

Crystal structure of Staphylococcus epidermidis Aap G511-spacer-G513 (consensus G5-spacer-consensus G5)

Released:
DOI: 10.2210/pdb5tu7/pdb
PDB entry 5tu7 coloured by chain, front view.
PDB entry 5tu7 coloured by chain, side view.
PDB entry 5tu7 coloured by chain, top view.
Source organism: Staphylococcus epidermidis RP62A
Primary publication:
Functional consequences of B-repeat sequence variation in the staphylococcal biofilm protein Aap: deciphering the assembly code.
Shelton CL, Conrady DG, Herr AB
Biochem J 474 427-443 (2017)
PMID: 27872164

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-177222 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Accumulation associated protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 208 amino acids
Theoretical weight: 22.3 KDa
Source organism: Staphylococcus epidermidis RP62A
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5HKE8 (Residues: 1889-2093; Coverage: 9%)
Gene names: SERP2398, aap
Sequence domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 23-ID-B
Spacegroup: P21212
Unit cell:
a: 43.2Å b: 55.1Å c: 185.19Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.26 0.256 0.307
Expression system: Escherichia coli

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Citations

2 review citations

Staphylococcal Biofilms in Atopic Dermatitis.
Gonzalez et al. (2017)
1 more