› 5vfz

X-ray diffraction
1.85Å resolution

Integrase from mycobacterium phage Brujita

Released:
DOI: 10.2210/pdb5vfz/pdb
PDB entry 5vfz coloured by chain, front view.
PDB entry 5vfz coloured by chain, side view.
PDB entry 5vfz coloured by chain, top view.
Source organism: Mycobacterium virus Brujita
Entry authors: VanDemark AP, Lunt B, Hatfull GF

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-110246 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Integrase Chain: A
Molecule details ›
Chain: A
Length: 318 amino acids
Theoretical weight: 36.11 KDa
Source organism: Mycobacterium virus Brujita
Expression system: Escherichia coli
UniProt:
  • Canonical: B5U3A1 (Residues: 1-318; Coverage: 100%)
Gene names: 33, BRUJITA_33
Sequence domains: Phage integrase family

Ligands and Environments

3 bound ligands:
Ligand GOL 1 x GOL
Ligand NA 1 x NA
Ligand ACT 2 x ACT
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU FR-E SUPERBRIGHT
Spacegroup: C2
Unit cell:
a: 133.213Å b: 50.05Å c: 60.679Å
α: 90° β: 115.34° γ: 90°
R-values:
R R work R free
0.164 0.164 0.182
Expression system: Escherichia coli

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