› 5w68

Electron Microscopy
3.3Å resolution

Type II secretin from Enteropathogenic Escherichia coli - GspD

Released:
DOI: 10.2210/pdb5w68/pdb
PDB entry 5w68 coloured by chain, front view.
PDB entry 5w68 coloured by chain, side view.
PDB entry 5w68 coloured by chain, top view.
Source organism: Escherichia coli O127:H6 str. E2348/69
Primary publication:
Structure and Membrane Topography of the Vibrio-Type Secretin Complex from the Type 2 Secretion System of Enteropathogenic Escherichia coli.
Hay ID, Belousoff MJ, Dunstan RA, Bamert RS, Lithgow T
J Bacteriol 200 (2018)
PMID: 29084860
Related structures: EMD-8778

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo pentadecamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-110615 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative type II secretion protein Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O
Length: 387 amino acids
Theoretical weight: 41.19 KDa
Source organism: Escherichia coli O127:H6 str. E2348/69
Expression system: Escherichia coli
UniProt:
  • Canonical: B7UI37 (Residues: 282-668; Coverage: 60%)
Gene names: E2348C_3249, gspD
Sequence domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.3Å
Relevant EMDB volumes: EMD-8778
Expression system: Escherichia coli

Quick links

Citations

5 review citations

Filamentous phages: masters of a microbial sharing economy.
Hay et al. (2019)
4 more

4 mentions without citation

Structure and Membrane Topography of the Vibrio-Type Secretin Complex from the Type 2 Secretion System of Enteropathogenic Escherichia coli.
Hay et al. (2018)
3 more