5w7g

Electron Microscopy
4.5Å resolution

An envelope of a filamentous hyperthermophilic virus carries lipids in a horseshoe conformation

Released:

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:

Structure analysis Details

Assembly composition:
hetero 44-mer (preferred)
PDBe Complex ID:
PDB-CPX-119336 (preferred)
Entry contents:
2 distinct polypeptide molecules
1 distinct DNA molecule
Macromolecules (3 distinct):
Major capsid protein 1 Chains: A, C, E, G, I, K, M, O, Q, S, U, W, Y, a, c, e, g, i, k, m, o
Molecule details ›
Chains: A, C, E, G, I, K, M, O, Q, S, U, W, Y, a, c, e, g, i, k, m, o
Length: 140 amino acids
Theoretical weight: 15.83 KDa
Source organism: Captovirus AFV1
UniProt:
  • Canonical: Q70LC6 (Residues: 1-140; Coverage: 100%)
Gene name: ORF140
Sequence domains: Filamentous archaeal viruses coat protein, C-terminal
Major capsid protein 2 Chains: B, D, F, H, J, L, N, P, R, T, V, X, Z, b, d, f, h, j, l, n, p
Molecule details ›
Chains: B, D, F, H, J, L, N, P, R, T, V, X, Z, b, d, f, h, j, l, n, p
Length: 132 amino acids
Theoretical weight: 15.02 KDa
Source organism: Captovirus AFV1
UniProt:
  • Canonical: Q70LC7 (Residues: 1-132; Coverage: 100%)
Gene name: ORF132
DNA (253-MER) Chains: q, r
Molecule details ›
Chains: q, r
Length: 252 nucleotides
Theoretical weight: 77.75 KDa

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.5Å
Relevant EMDB volumes: EMD-8780