5wgb

X-ray diffraction
2.75Å resolution

Crystal Structure of the Human mitochondrial Cysteine Desulfurase in complex with ISD11 and E. coli ACP1 protein at 2.75A

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-110549 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Cysteine desulfurase Chain: A
Molecule details ›
Chain: A
Length: 426 amino acids
Theoretical weight: 47.4 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9Y697 (Residues: 56-457; Coverage: 88%)
Gene names: HUSSY-08, NFS1, NIFS
Sequence domains: Aminotransferase class-V
LYR motif-containing protein 4 Chain: B
Molecule details ›
Chain: B
Length: 91 amino acids
Theoretical weight: 10.76 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9HD34 (Residues: 1-91; Coverage: 100%)
Gene names: C6orf149, CGI-203, ISD11, LYRM4
Sequence domains: Complex 1 protein (LYR family)
Acyl carrier protein Chain: C
Molecule details ›
Chain: C
Length: 77 amino acids
Theoretical weight: 8.51 KDa
Source organism: Escherichia coli S88
Expression system: Escherichia coli
UniProt:
  • Canonical: B7MJ81 (Residues: 2-78; Coverage: 99%)
Gene names: ECS88_1108, acpP
Sequence domains: Phosphopantetheine attachment site

Ligands and Environments


Cofactor: Ligand PLP 1 x PLP
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: CLSI BEAMLINE 08ID-1
Spacegroup: R32
Unit cell:
a: 140.841Å b: 140.841Å c: 203.301Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.216 0.213 0.255
Expression system: Escherichia coli