› 5wwm

X-ray diffraction
2.81Å resolution

Crystal structure of the TPR domain of Rrp5

Released:
DOI: 10.2210/pdb5wwm/pdb
PDB entry 5wwm coloured by chain, front view.
PDB entry 5wwm coloured by chain, side view.
PDB entry 5wwm coloured by chain, top view.
Source organism: Saccharomyces cerevisiae S288C
Primary publication:
Correction: Molecular architecture of the 90S small subunit pre-ribosome.
Sun Q, Zhu X, Qi J, An W, Lan P, Tan D, Chen R, Wang B, Zheng S, Zhang C, Chen X, Zhang W, Chen J, Dong MQ, Ye K
Elife 6 (2017)
PMID: 28649947

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-170121 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
rRNA biogenesis protein RRP5 Chain: A
Molecule details ›
Chain: A
Length: 331 amino acids
Theoretical weight: 38.48 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Escherichia coli
UniProt:
  • Canonical: Q05022 (Residues: 1399-1729; Coverage: 19%)
Gene names: FMI1, RRP5, YM9959.11C, YMR229C

Ligands and Environments

1 bound ligand:
Ligand SO4 3 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U
Spacegroup: P3221
Unit cell:
a: 114.526Å b: 114.526Å c: 70.933Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.207 0.205 0.258
Expression system: Escherichia coli

Quick links

Citations

6 citation in other articles

Visualizing late states of human 40S ribosomal subunit maturation.
Ameismeier et al. (2018)
5 more

4 mentions without citation

Molecular architecture of the 90S small subunit pre-ribosome.
Sun et al. (2017)
3 more