5xgc

X-ray diffraction
2.1Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
monomeric (preferred)
PDBe Complex ID:
PDB-CPX-156545 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Rap1 GTPase-GDP dissociation stimulator 1 Chain: A
Molecule details ›
Chain: A
Length: 503 amino acids
Theoretical weight: 55.03 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P52306 (Residues: 61-607; Coverage: 82%)
Gene names: RAP1GDS1, SMGGDS
Sequence domains: Armadillo/beta-catenin-like repeat

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL44XU
Spacegroup: C2
Unit cell:
a: 194.33Å b: 51.115Å c: 52.444Å
α: 90° β: 92.77° γ: 90°
R-values:
R R work R free
0.217 0.215 0.252
Expression system: Escherichia coli