5xm3

X-ray diffraction
1.7Å resolution

Crystal Structure of Methanol dehydrogenase from Methylophaga aminisulfidivorans

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107129 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Methanol dehydrogenase large subunit Chains: A, C
Molecule details ›
Chains: A, C
Length: 627 amino acids
Theoretical weight: 69.34 KDa
Source organism: Methylophaga aminisulfidivorans MP
Expression system: Methylophaga aminisulfidivorans MP
UniProt:
  • Canonical: A3FJ48 (Residues: 1-627; Coverage: 100%)
Gene name: MAMP_01209
Sequence domains: PQQ-like domain
Structure domains: Quinoprotein alcohol dehydrogenase-like superfamily
Methanol dehydrogenase [cytochrome c] subunit 2 Chains: B, D
Molecule details ›
Chains: B, D
Length: 90 amino acids
Theoretical weight: 9.98 KDa
Source organism: Methylophaga aminisulfidivorans MP
Expression system: Methylophaga aminisulfidivorans MP
UniProt:
  • Canonical: A3FJ51 (Residues: 1-90; Coverage: 100%)
Gene name: MAMP_01202
Sequence domains: Methanol dehydrogenase beta subunit
Structure domains: Methanol dehydrogenase, beta subunit

Ligands and Environments


Cofactor: Ligand PQQ 2 x PQQ
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PAL/PLS BEAMLINE 5C (4A)
Spacegroup: P21
Unit cell:
a: 63.926Å b: 109.479Å c: 95.554Å
α: 90° β: 100.48° γ: 90°
R-values:
R R work R free
0.153 0.151 0.181
Expression system: Methylophaga aminisulfidivorans MP