› 5xmd

X-ray diffraction
2Å resolution

Crystal structure of epoxide hydrolase VrEH1 from Vigna radiata

Released:
DOI: 10.2210/pdb5xmd/pdb
PDB entry 5xmd coloured by chain, front view.
PDB entry 5xmd coloured by chain, side view.
PDB entry 5xmd coloured by chain, top view.
Source organism: Vigna radiata
Entry authors: Kong XD, Xu JH, Zhou JH

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-122985 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
AB hydrolase-1 domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 353 amino acids
Theoretical weight: 39.34 KDa
Source organism: Vigna radiata
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: E5L4L1 (Residues: 1-319; Coverage: 100%)
Sequence domains: alpha/beta hydrolase fold
Structure domains: alpha/beta hydrolase

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U1
Spacegroup: P21
Unit cell:
a: 101.691Å b: 51.892Å c: 124.294Å
α: 90° β: 94.27° γ: 90°
R-values:
R R work R free
0.182 0.18 0.223
Expression system: Escherichia coli BL21(DE3)

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