› 5zrt

X-ray diffraction
1.9Å resolution

Crystal structure of human C1ORF123 protein

Released:
DOI: 10.2210/pdb5zrt/pdb
PDB entry 5zrt coloured by chain, front view.
PDB entry 5zrt coloured by chain, side view.
PDB entry 5zrt coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Crystal structure and functional analysis of human C1ORF123.
A Rahaman SN, Mat Yusop J, Mohamed-Hussein ZA, Aizat WM, Ho KL, Teh AH, Waterman J, Tan BK, Tan HL, Li AY, Chen ES, Ng CL
PeerJ 6 e5377 (2018)
PMID: 30280012

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-192663 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
CXXC motif containing zinc binding protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 180 amino acids
Theoretical weight: 20.24 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9NWV4 (Residues: 1-160; Coverage: 100%)
Gene names: C1orf123, CZIB
Sequence domains: CXXC motif containing zinc binding protein, eukaryotic

Ligands and Environments

4 bound ligands:
Ligand GOL 6 x GOL
Ligand CL 2 x CL
Ligand ZN 2 x ZN
Ligand BME 1 x BME
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I02
Spacegroup: P212121
Unit cell:
a: 59.32Å b: 65.35Å c: 95.05Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.178 0.175 0.22
Expression system: Escherichia coli

Quick links

Citations

2 citation in other articles

New Proteins Contributing to Immune Cell Infiltration and Pannus Formation of Synovial Membrane from Arthritis Diseases.
de Seny et al. (2021)
1 more

2 mentions without citation

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome.
Barandun et al. (2019)
1 more