6bkp

X-ray diffraction
2.05Å resolution

Crystal structure of the A/Michigan/15/2014 (H3N2) influenza virus hemagglutinin apo form

Released:
Model geometry
Fit model/data

Function and Biology Details

Structure analysis Details

Assemblies composition:
homo trimer
hetero hexamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-102552 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (4 distinct):
Hemagglutinin Chain: A
Molecule details ›
Chain: A
Length: 323 amino acids
Theoretical weight: 35.92 KDa
Source organism: Influenza A virus (A/Michigan/15/2014(H3N2))
Expression system: Trichoplusia ni
UniProt:
  • Canonical: A0A0Y0S9M3 (Residues: 27-345; Coverage: 56%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains: Hemagglutinin (Ha1 Chain); Chain: A; domain 1
Hemagglutinin Chain: B
Molecule details ›
Chain: B
Length: 174 amino acids
Theoretical weight: 20 KDa
Source organism: Influenza A virus (A/Michigan/15/2014(H3N2))
Expression system: Trichoplusia ni
UniProt:
  • Canonical: A0A0N9RDU4 (Residues: 346-519; Coverage: 31%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains: Hemagglutinin Ectodomain; Chain B

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, BMA
1 bound ligand:
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: SSRL BEAMLINE BL12-2
Spacegroup: R32
Unit cell:
a: 100.326Å b: 100.326Å c: 394.081Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.193 0.192 0.222
Expression system: Trichoplusia ni