› 6dke

X-ray diffraction
1.76Å resolution

The X-ray crystal structure of Streptococcus pneumoniae Fatty Acid Kinase (Fak) B1 protein loaded with palmitic acid (C16:0) to 1.76 Angstrom resolution

Released:
DOI: 10.2210/pdb6dke/pdb
PDB entry 6dke coloured by chain, front view.
PDB entry 6dke coloured by chain, side view.
PDB entry 6dke coloured by chain, top view.
Source organism: Streptococcus pneumoniae
Entry authors: Cuypers MG, Subramanian C, White SW, Rock CO

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-184124 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DegV domain-containing protein spr1415 Chain: A
Molecule details ›
Chain: A
Length: 316 amino acids
Theoretical weight: 34.54 KDa
Source organism: Streptococcus pneumoniae
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8DP17 (Residues: 1-282; Coverage: 100%)
Gene name: spr1415
Sequence domains: Uncharacterised protein, DegV family COG1307
Structure domains: Rossmann fold

Ligands and Environments

1 bound ligand:
Ligand PLM 1 x PLM
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-ID
Spacegroup: P21
Unit cell:
a: 46.825Å b: 62.337Å c: 50.43Å
α: 90° β: 95.94° γ: 90°
R-values:
R R work R free
0.171 0.17 0.206
Expression system: Escherichia coli

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