6ef0

Electron Microscopy
4.43Å resolution

Yeast 26S proteasome bound to ubiquitinated substrate (1D* motor state)

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero tetradecamer (preferred)
PDBe Complex ID:
PDB-CPX-139776 (preferred)
Entry contents:
14 distinct polypeptide molecules
Macromolecules (14 distinct):
Proteasome subunit alpha type-1 Chain: A
Molecule details ›
Chain: A
Length: 238 amino acids
Theoretical weight: 26.8 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Saccharomyces cerevisiae W303
UniProt:
  • Canonical: P21243 (Residues: 11-248; Coverage: 94%)
Gene names: PRC2, PRS2, SCL1, YGL011C
Sequence domains:
Proteasome subunit alpha type-2 Chain: B
Molecule details ›
Chain: B
Length: 250 amino acids
Theoretical weight: 27.19 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Saccharomyces cerevisiae W303
UniProt:
  • Canonical: P23639 (Residues: 1-250; Coverage: 100%)
Gene names: PRE8, PRS4, YML092C
Sequence domains:
Proteasome subunit alpha type-3 Chain: C
Proteasome subunit alpha type-4 Chain: D
Proteasome subunit alpha type-5 Chain: E
Proteasome subunit alpha type-6 Chain: F
Probable proteasome subunit alpha type-7 Chain: G
26S proteasome regulatory subunit 7 homolog Chain: H
26S proteasome regulatory subunit 4 homolog Chain: I
26S proteasome regulatory subunit 8 homolog Chain: J
26S proteasome regulatory subunit 6B homolog Chain: K
26S proteasome subunit RPT4 Chain: L
26S proteasome regulatory subunit 6A Chain: M
G2/mitotic-specific cyclin-B Chain: s

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this EM entry.
Resolution: 4.43Å
Relevant EMDB volumes: EMD-9042
Expression systems:
  • Saccharomyces cerevisiae W303
  • Escherichia coli BL21