› 6gms

Solution NMR

Solution NMR structure of the major type IV pilin PpdD from enterohemorrhagic Escherichia coli (EHEC)

Released:
DOI: 10.2210/pdb6gms/pdb
PDB entry 6gms coloured by chain, ensemble of 20 models, front view.
PDB entry 6gms coloured by chain, ensemble of 20 models, side view.
PDB entry 6gms coloured by chain, ensemble of 20 models, top view.
Source organism: Escherichia coli O157:H7
Primary publication:
Structure and Assembly of the Enterohemorrhagic Escherichia coli Type 4 Pilus.
Bardiaux B, de Amorim GC, Luna Rico A, Zheng W, Guilvout I, Jollivet C, Nilges M, Egelman EH, Izadi-Pruneyre N, Francetic O
Structure 27 1082-1093.e5 (2019)
PMID: 31056419

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-186860 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Prepilin peptidase-dependent pilin Chain: A
Molecule details ›
Chain: A
Length: 132 amino acids
Theoretical weight: 14.24 KDa
Source organism: Escherichia coli O157:H7
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q8X974 (Residues: 32-146; Coverage: 79%)
Gene names: ECs_0112, ppdD

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 88%
Refinement method: simulated annealing
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

7 review citations

Structure and function of minor pilins of type IV pili.
Jacobsen et al. (2020)
6 more

1 mention without citation

Structure and Assembly of the Enterohemorrhagic Escherichia coli Type 4 Pilus.
Bardiaux et al. (2019)