6hy0

Electron Microscopy
3.5Å resolution

Atomic models of P1, P4 C-terminal fragment and P8 fitted in the bacteriophage phi6 nucleocapsid reconstructed with icosahedral symmetry

Released:

Function and Biology Details

Reaction catalysed:
NTP + H(2)O = NDP + phosphate
Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
hetero 780-mer (preferred)
PDBe Complex ID:
PDB-CPX-139642 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Major inner protein P1 Chains: A, B
Molecule details ›
Chains: A, B
Length: 769 amino acids
Theoretical weight: 85.08 KDa
Source organism: Cystovirus phi6
UniProt:
  • Canonical: P11126 (Residues: 1-769; Coverage: 100%)
Gene name: P1
Sequence domains: Major inner capsid protein P1
Packaging enzyme P4 Chain: C
Molecule details ›
Chain: C
Length: 332 amino acids
Theoretical weight: 35.2 KDa
Source organism: Cystovirus phi6
UniProt:
  • Canonical: P11125 (Residues: 1-332; Coverage: 100%)
Gene name: P4
Sequence domains: ATPase P4 of dsRNA bacteriophage phi-12
Major outer capsid protein Chains: D, E, F, G, H, I, J, K, L, M
Molecule details ›
Chains: D, E, F, G, H, I, J, K, L, M
Length: 149 amino acids
Theoretical weight: 16.02 KDa
Source organism: Cystovirus phi6
UniProt:
  • Canonical: P07579 (Residues: 1-149; Coverage: 100%)
Gene name: P8

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.5Å
Relevant EMDB volumes: EMD-0299