6if3

X-ray diffraction
1.5Å resolution

Complex structure of Rab35 and its effector ACAP2

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-172177 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 Chain: A
Molecule details ›
Chain: A
Length: 174 amino acids
Theoretical weight: 19 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q15057 (Residues: 601-770; Coverage: 22%)
Gene names: ACAP2, CENTB2, KIAA0041
Sequence domains: Ankyrin repeats (3 copies)
Ras-related protein Rab-35 Chain: B
Molecule details ›
Chain: B
Length: 186 amino acids
Theoretical weight: 21.1 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q15286 (Residues: 1-180; Coverage: 90%)
Gene names: RAB1C, RAB35, RAY
Sequence domains: Ras family
Structure domains: P-loop containing nucleotide triphosphate hydrolases

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL19U1
Spacegroup: P212121
Unit cell:
a: 44.741Å b: 53.468Å c: 144.008Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.174 0.172 0.205
Expression system: Escherichia coli BL21(DE3)