› 6itf

Electron Microscopy
4.7Å resolution

Icosahedral asymmetric unit (iASU) model of the less refined, coarse part of FHV eluted particle

Released:
DOI: 10.2210/pdb6itf/pdb
PDB entry 6itf coloured by chain, front view.
PDB entry 6itf coloured by chain, side view.
PDB entry 6itf coloured by chain, top view.
Source organism: Flock House virus
Primary publication:
Structural Dynamics of Nonenveloped Virus Disassembly Intermediates.
Azad K, Banerjee M
J Virol 93 (2019)
PMID: 31484752
Related structures: EMD-9730

Function and Biology Details

Reaction catalysed: 
Hydrolysis of an asparaginyl bond involved in the maturation of the structural protein of the virus, typically -Asn-|-Ala- or -Asn-|-Phe-.
Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo 180-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-146350 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid protein beta Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 363 amino acids
Theoretical weight: 39.37 KDa
Source organism: Flock House virus
Expression system: Drosophila melanogaster
UniProt:
  • Canonical: P12870 (Residues: 1-363; Coverage: 89%)
Gene name: alpha
Sequence domains: Peptidase A6 family

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.7Å
Relevant EMDB volumes: EMD-9730
Expression system: Drosophila melanogaster

Quick links

Citations

1 review citation

Structural and dynamic asymmetry in icosahedrally symmetric virus capsids.
Jana et al. (2020)
3 other articles

1 mention without citation

Structural Dynamics of Nonenveloped Virus Disassembly Intermediates.
Azad et al. (2019)