› 6ji1

Electron Microscopy
4.1Å resolution

Tetrameric PepTSo2 incorporated in salipro nano particle

Released:
DOI: 10.2210/pdb6ji1/pdb
PDB entry 6ji1 coloured by chain, front view.
PDB entry 6ji1 coloured by chain, side view.
PDB entry 6ji1 coloured by chain, top view.
Source organism: Shewanella oneidensis MR-1
Primary publication:
Structural basis for oligomerization of the prokaryotic peptide transporter PepTSo2.
Nagamura R, Fukuda M, Kawamoto A, Matoba K, Dohmae N, Ishitani R, Takagi J, Nureki O
Acta Crystallogr F Struct Biol Commun 75 348-358 (2019)
PMID: 31045564
Related structures: EMD-9832

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-184401 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Proton:oligopeptide symporter POT family Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 527 amino acids
Theoretical weight: 57.63 KDa
Source organism: Shewanella oneidensis MR-1
Expression system: Escherichia coli K-12
UniProt:
  • Canonical: Q8EHE6 (Residues: 1-516; Coverage: 100%)
Gene name: SO_1277
Sequence domains: POT family

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.1Å
Relevant EMDB volumes: EMD-9832
Expression system: Escherichia coli K-12

Quick links

Citations

3 citation in other articles

Structures and General Transport Mechanisms by the Major Facilitator Superfamily (MFS).
Drew et al. (2021)
2 more

3 mentions without citation

Recent advances in understanding prodrug transport through the SLC15 family of proton-coupled transporters.
Minhas et al. (2020)
2 more