› 6jio

X-ray diffraction
2.6Å resolution

Human LXR-beta in complex with a ligand

Released:
DOI: 10.2210/pdb6jio/pdb
PDB entry 6jio coloured by chain, front view.
PDB entry 6jio coloured by chain, side view.
PDB entry 6jio coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Identify liver X receptor β modulator building blocks by developing a fluorescence polarization-based competition assay.
Zhang Z, Chen H, Chen Z, Ding P, Ju Y, Gu Q, Xu J, Zhou H
Eur J Med Chem 178 458-467 (2019)
PMID: 31202993

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-157162 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Oxysterols receptor LXR-beta Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 274 amino acids
Theoretical weight: 31.17 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P55055 (Residues: 214-460; Coverage: 54%)
Gene names: LXRB, NER, NR1H2, UNR
Sequence domains: Ligand-binding domain of nuclear hormone receptor

Ligands and Environments

1 bound ligand:
Ligand BQ3 2 x BQ3
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL19U1
Spacegroup: P212121
Unit cell:
a: 67.137Å b: 106.888Å c: 150.803Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.264 0.262 0.285
Expression system: Escherichia coli

Quick links

Citations

1 review citation

Chemical Screening of Nuclear Receptor Modulators.
Ishigami-Yuasa et al. (2020)