› 6khm

X-ray diffraction
2.4Å resolution

Lipase (Open form)

Released:
DOI: 10.2210/pdb6khm/pdb
PDB entry 6khm coloured by chain, front view.
PDB entry 6khm coloured by chain, side view.
PDB entry 6khm coloured by chain, top view.
Source organism: Cutibacterium acnes HL110PA4
Entry authors: Kim HJ, Kwon AR

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-241485 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Hydrolase, alpha/beta domain protein Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z
Length: 317 amino acids
Theoretical weight: 34.47 KDa
Source organism: Cutibacterium acnes HL110PA4
Expression system: Escherichia coli

Ligands and Environments

5 bound ligands:
Ligand DKL 5 x DKL
Ligand DKO 3 x DKO
Ligand DK6 4 x DK6
Ligand DKF 11 x DKF
Ligand DK9 3 x DK9
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PAL/PLS BEAMLINE 7A (6B, 6C1)
Spacegroup: P31
Unit cell:
a: 185.857Å b: 185.857Å c: 205.099Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.188 0.185 0.256
Expression system: Escherichia coli

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