6l8q

X-ray diffraction
3.1Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero octamer (preferred)
PDBe Complex ID:
PDB-CPX-125686 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (4 distinct):
Dipeptidyl peptidase 4 Chains: A, C, E, G
Molecule details ›
Chains: A, C, E, G
Length: 731 amino acids
Theoretical weight: 84.65 KDa
Source organism: Myotis davidii
Expression system: Trichoplusia ni
UniProt:
  • Canonical: L5LQ33 (Residues: 24-748; Coverage: 97%)
Gene name: MDA_GLEAN10024208
Sequence domains:
Spike protein S1 Chains: B, D, F, H
Molecule details ›
Chains: B, D, F, H
Length: 246 amino acids
Theoretical weight: 27.11 KDa
Source organism: Middle East respiratory syndrome-related coronavirus
Expression system: Trichoplusia ni
UniProt:
  • Canonical: K9N5Q8 (Residues: 367-606; Coverage: 18%)
Gene names: 3, S
Sequence domains: Betacoronavirus spike glycoprotein S1, receptor binding

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, BMA
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U
Spacegroup: P21
Unit cell:
a: 114.657Å b: 273.674Å c: 115.234Å
α: 90° β: 119.682° γ: 90°
R-values:
R R work R free
0.202 0.2 0.241
Expression system: Trichoplusia ni