PDB 6nf2 structure summary ‹ Protein Data Bank in Europe (PDBe)

Function and Biology Details

Biochemical function:

structural molecule activity

Biological process:

not assigned

Cellular component:

viral envelope

Sequence domains:

2 more domains

Structure analysis Details

Assembly composition:

hetero 24-mer (preferred)

Assembly name:

Envelope glycoprotein gp160 and IG-heavy chain and IG-light kappa chain and IG-heavy chain and IG-light lambda chain and IG-heavy chain and IG-light k... (preferred)
show full assembly name

PDBe Complex ID:

PDB-CPX-212145 (preferred)

Entry contents:

8 distinct polypeptide molecules

Macromolecules (15 distinct):

Transmembrane protein gp41 Chains: A, G, Q

Molecule details ›

Chains: A, G, Q
Length: 480 amino acids
Theoretical weight: 53.93 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:

Canonical: Q2N0S6 (Residues: 30-509; Coverage: 56%)

Gene name: env
Sequence domains: Envelope glycoprotein GP120

Transmembrane protein gp41 Chains: B, I, R

Molecule details ›

Chains: B, I, R
Length: 153 amino acids
Theoretical weight: 17.15 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:

Canonical: Q2N0S6 (Residues: 509-661; Coverage: 18%)

Gene name: env
Sequence domains: Retroviral envelope protein

VRC03 Heavy Chain Chains: C, N, V

Molecule details ›

Chains: C, N, V
Length: 235 amino acids
Theoretical weight: 25.45 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

VRC03 Light Chain Chains: D, M, U

Molecule details ›

Chains: D, M, U
Length: 209 amino acids
Theoretical weight: 23.15 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

PGT122 Heavy Chain Chains: E, J, S

Molecule details ›

Chains: E, J, S
Length: 235 amino acids
Theoretical weight: 25.43 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

PGT122 Light Chain Chains: F, K, T

Molecule details ›

Chains: F, K, T
Length: 213 amino acids
Theoretical weight: 22.88 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

0PV-c.01 Heavy Chain Chains: H, O, W

Molecule details ›

Chains: H, O, W
Length: 229 amino acids
Theoretical weight: 24.18 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

0PV-c.01 Light Chain Chains: L, P, X

Molecule details ›

Chains: L, P, X
Length: 219 amino acids
Theoretical weight: 23.97 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens