6orn

Electron Microscopy
4.05Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dodecamer (preferred)
PDBe Complex ID:
PDB-CPX-212152 (preferred)
Entry contents:
4 distinct polypeptide molecules
Macromolecules (9 distinct):
Transmembrane protein gp41 Chains: C, J, Q
Molecule details ›
Chains: C, J, Q
Length: 153 amino acids
Theoretical weight: 17.13 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:
  • Canonical: Q2N0S6 (Residues: 509-661; Coverage: 18%)
Gene name: env
Sequence domains: Retroviral envelope protein
Envelope glycoprotein gp160 Chains: G, K, R
Molecule details ›
Chains: G, K, R
Length: 481 amino acids
Theoretical weight: 54.15 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:
  • Canonical: Q2N0S6 (Residues: 30-508; Coverage: 56%)
Gene name: env
Sequence domains: Envelope glycoprotein GP120
10-1074 antibody Fab heavy chain Chains: A, F, O
Molecule details ›
Chains: A, F, O
Length: 238 amino acids
Theoretical weight: 25.66 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
10-1074 antibody Fab light chain Chains: B, I, P
Molecule details ›
Chains: B, I, P
Length: 214 amino acids
Theoretical weight: 23.18 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NAG, BMA
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.05Å
Relevant EMDB volumes: EMD-20175
Expression system: Homo sapiens