› 6ouc

Electron Microscopy
2.8Å resolution

Asymmetric focsued reconstruction of human norovirus GII.2 Snow Mountain Virus strain VLP asymmetric unit in T=1 symmetry

Released:
DOI: 10.2210/pdb6ouc/pdb
PDB entry 6ouc coloured by chain, front view.
PDB entry 6ouc coloured by chain, side view.
PDB entry 6ouc coloured by chain, top view.
Source organism: Snow Mountain virus
Primary publication:
High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
Jung J, Grant T, Thomas DR, Diehnelt CW, Grigorieff N, Joshua-Tor L
Proc Natl Acad Sci U S A 116 12828-12832 (2019)
PMID: 31182604
Related structures: EMD-20202

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-182358 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Viral protein 1 Chain: A
Molecule details ›
Chain: A
Length: 542 amino acids
Theoretical weight: 59.32 KDa
Source organism: Snow Mountain virus
Expression system: Nicotiana
UniProt:
  • Canonical: Q80RD6 (Residues: 1-542; Coverage: 100%)
Gene name: ORF2
Sequence domains:

Ligands and Environments

1 bound ligand:
Ligand ZN 1 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 2.8Å
Relevant EMDB volumes: EMD-20202
Expression system: Nicotiana

Quick links

Citations

5 review citations

Applications of Charge Detection Mass Spectrometry in Molecular Biology and Biotechnology.
Jarrold MF. (2022)
4 more

4 mentions without citation

High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
Jung et al. (2019)
3 more