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› 6p61

X-ray diffraction
1.95Å resolution

Structure of a Glycosyltransferase from Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197)

Released:
DOI: 10.2210/pdb6p61/pdb
Model geometry
Fit model/data
PDB entry 6p61 coloured by chain, front view.
PDB entry 6p61 coloured by chain, side view.
PDB entry 6p61 coloured by chain, top view.
Source organism: Leptospira borgpetersenii serovar Hardjo-bovis str. JB197
Entry author: Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-170119 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glycosyltransferase 2-like domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 228 amino acids
Theoretical weight: 26.7 KDa
Source organism: Leptospira borgpetersenii serovar Hardjo-bovis str. JB197
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'
UniProt:
  • Canonical: Q04TP4 (Residues: 1-220; Coverage: 100%)
Gene name: LBJ_1113
Sequence domains: Glycosyl transferase family 2

Ligands and Environments

3 bound ligands:
Ligand EDO 14 x EDO
Ligand CIT 6 x CIT
Ligand GOL 2 x GOL
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: ALS BEAMLINE 5.0.2
Spacegroup: P21
Unit cell:
a: 56.25Å b: 123.17Å c: 76.77Å
α: 90° β: 92.44° γ: 90°
R-values:
R R work R free
0.152 0.151 0.184
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'

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