PDB 6q4t structure summary ‹ Protein Data Bank in Europe (PDBe)

Function and Biology Details

Reaction catalysed:

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

Biochemical function:

DNA-directed DNA polymerase activity

Biological process:

not assigned

Cellular component:

not assigned

Sequence domains:

1 more domain

Structure analysis Details

Assembly composition:

hetero trimer (preferred)

Assembly name:

Homing endonuclease PI-PkoII and DNA (preferred)

PDBe Complex ID:

PDB-CPX-120481 (preferred)

Entry contents:

1 distinct polypeptide molecule
2 distinct DNA molecules

Macromolecules (3 distinct):

Homing endonuclease PI-PkoII Chain: A

Molecule details ›

Chain: A
Length: 774 amino acids
Theoretical weight: 90.06 KDa
Source organism: Thermococcus kodakarensis KOD1
Expression system: Escherichia coli
UniProt:

Canonical: P77933 (Residues: 1-1671; Coverage: 46%)

Gene names: TK0001, pol
Sequence domains:

Structure domains:

DNA (5'-D(P*AP*AP*CP*TP*GP*TP*GP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3') Chain: T

Molecule details ›

Chain: T
Length: 16 nucleotides
Theoretical weight: 4.93 KDa
Source organism: synthetic construct
Expression system: Not provided

DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*CP*AP*C)-3') Chain: P

Molecule details ›

Chain: P
Length: 12 nucleotides
Theoretical weight: 3.6 KDa
Source organism: synthetic construct
Expression system: Not provided