› 6qyj

Electron Microscopy
3.4Å resolution

The cryo-EM structure of the connector of the mature bacteriophage phi29

Released:
DOI: 10.2210/pdb6qyj/pdb
PDB entry 6qyj coloured by chain, front view.
PDB entry 6qyj coloured by chain, side view.
PDB entry 6qyj coloured by chain, top view.
Source organism: Bacillus virus phi29
Primary publication:
Structural assembly of the tailed bacteriophage ϕ29.
Xu J, Wang D, Gui M, Xiang Y
Nat Commun 10 2366 (2019)
PMID: 31147544
Related structures: EMD-4678

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dodecamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-137597 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Portal protein Chains: 0a, 0b, 0c, 0d, 0e, 0f, 0g, 0h, 0i, 0j, 0k, 0l
Molecule details ›
Chains: 0a, 0b, 0c, 0d, 0e, 0f, 0g, 0h, 0i, 0j, 0k, 0l
Length: 309 amino acids
Theoretical weight: 35.92 KDa
Source organism: Bacillus virus phi29
UniProt:
  • Canonical: P04332 (Residues: 1-309; Coverage: 100%)
Gene name: 10
Sequence domains: Phage Connector (GP10)

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.4Å
Relevant EMDB volumes: EMD-4678

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Citations

6 review citations

NMR as a "Gold Standard" Method in Drug Design and Discovery.
Emwas et al. (2020)
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