› 6qyz

Electron Microscopy
4.6Å resolution

The cryo-EM structure of prohead RNA in bacteriophage phi29 prohead

Released:
DOI: 10.2210/pdb6qyz/pdb
PDB entry 6qyz coloured by chain, front view.
PDB entry 6qyz coloured by chain, side view.
PDB entry 6qyz coloured by chain, top view.
Source organism: Bacillus virus phi29
Primary publication:
Structural assembly of the tailed bacteriophage ϕ29.
Xu J, Wang D, Gui M, Xiang Y
Nat Commun 10 2366 (2019)
PMID: 31147544
Related structures: EMD-4680

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo pentamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-195844 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
the prohead RNA (71-MER) in bacteriophage phi29 Chains: A, B, C, D, E
Molecule details ›
Chains: A, B, C, D, E
Length: 120 nucleotides
Theoretical weight: 38.42 KDa
Source organism: Bacillus virus phi29
Sequence domains: Bacteriophage pRNA

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.6Å
Relevant EMDB volumes: EMD-4680

Quick links

Citations

5 review citations

NMR as a "Gold Standard" Method in Drug Design and Discovery.
Emwas et al. (2020)
4 more

1 mention without citation

Structural Insights into RNA Dimerization: Motifs, Interfaces and Functions.
Bou-Nader et al. (2020)