6sml

Electron Microscopy
3.4Å resolution

Structure of the RagAB peptide importer in the 'open-open' state

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
PDBe Complex ID:
PDB-CPX-123556 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Lipoprotein RagB Chain: A
Molecule details ›
Chain: A
Length: 482 amino acids
Theoretical weight: 54.43 KDa
Source organism: Porphyromonas gingivalis W83
UniProt:
  • Canonical: F5H948 (Residues: 20-501; Coverage: 96%)
Gene names: PG_0186, ragB
Sequence domains:
RagA protein Chain: B
Molecule details ›
Chain: B
Length: 915 amino acids
Theoretical weight: 101.58 KDa
Source organism: Porphyromonas gingivalis W83
UniProt:
  • Canonical: Q7MXJ7 (Residues: 103-1017; Coverage: 92%)
Gene names: PG_0185, ragA
Sequence domains:
GLY-THR-GLY-GLY-SER-THR-GLY-THR-THR-SER-ALA-GLY Chain: C
Molecule details ›
Chain: C
Length: 12 amino acids
Theoretical weight: 953 Da
Source organism: Porphyromonas gingivalis W83

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.4Å
Relevant EMDB volumes: EMD-10243