› 6su6

X-ray diffraction
2.4Å resolution

Complex between a UDP-glucosyltransferase from Polygonum tinctorium capable of glucosylating indoxyl and UDP-glucose

Released:
DOI: 10.2210/pdb6su6/pdb
Model geometry
Fit model/data
PDB entry 6su6 coloured by chain, front view.
PDB entry 6su6 coloured by chain, side view.
PDB entry 6su6 coloured by chain, top view.
Source organism: Persicaria tinctoria
Primary publication:
O-/N-/S-Specificity in Glycosyltransferase Catalysis: From Mechanistic Understanding to Engineering
Teze D, Coines J, Fredslund F, Dubey KD, Bidart GN, Adams PD, Dueber JE, Svensson B, Rovira C, Welner DH
ACS Catalysis 11 (2021)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-104413 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glycosyltransferase Chains: A, B
Molecule details ›
Chains: A, B
Length: 499 amino acids
Theoretical weight: 54.52 KDa
Source organism: Persicaria tinctoria
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A2R2JFJ4 (Residues: 1-478; Coverage: 100%)
Sequence domains: UDP-glucoronosyl and UDP-glucosyl transferase

Ligands and Environments

1 bound ligand:
Ligand UPG 2 x UPG
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: ALS BEAMLINE 5.0.3
Spacegroup: P21212
Unit cell:
a: 121.24Å b: 174.17Å c: 48.51Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.232 0.23 0.263
Expression system: Escherichia coli BL21(DE3)

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