6t48

X-ray diffraction
2.17Å resolution

Bovine enterovirus F3 in complex with glutathione and a Cysteinylglycine dipeptide

Released:

Function and Biology Details

Reactions catalysed:
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Selective cleavage of Gln-|-Gly bond in the poliovirus polyprotein. In other picornavirus reactions Glu may be substituted for Gln, and Ser or Thr for Gly.
Selective cleavage of Tyr-|-Gly bond in picornavirus polyprotein.
NTP + H(2)O = NDP + phosphate
Biochemical function:
Biological process:
  • not assigned
Cellular component:

Structure analysis Details

Assembly composition:
hetero 240-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-173707 (preferred)
Entry contents:
4 distinct polypeptide molecules
Macromolecules (4 distinct):
VP1 Chain: A
Molecule details ›
Chain: A
Length: 275 amino acids
Theoretical weight: 30.25 KDa
Source organism: Enterovirus F
UniProt:
  • Canonical: Q2LKZ0 (Residues: 559-833; Coverage: 13%)
Sequence domains: picornavirus capsid protein
VP2 Chain: B
Molecule details ›
Chain: B
Length: 244 amino acids
Theoretical weight: 26.76 KDa
Source organism: Enterovirus F
UniProt:
  • Canonical: Q2LKZ0 (Residues: 72-315; Coverage: 11%)
Sequence domains: picornavirus capsid protein
VP3 Chain: C
Molecule details ›
Chain: C
Length: 243 amino acids
Theoretical weight: 27.15 KDa
Source organism: Enterovirus F
UniProt:
  • Canonical: Q2LKZ0 (Residues: 316-558; Coverage: 11%)
Sequence domains: picornavirus capsid protein
VP4 Chain: D
Molecule details ›
Chain: D
Length: 71 amino acids
Theoretical weight: 7.71 KDa
Source organism: Enterovirus F
UniProt:
  • Canonical: Q2LKZ0 (Residues: 1-71; Coverage: 3%)
Sequence domains: Picornavirus coat protein (VP4)

Ligands and Environments

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I03
Spacegroup: I222
Unit cell:
a: 344Å b: 349.4Å c: 352.7Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.2 0.2 0.203