› 6v33

X-ray diffraction
2.03Å resolution

X-ray structure of a sugar N-formyltransferase from Pseudomonas congelans

Released:
DOI: 10.2210/pdb6v33/pdb
PDB entry 6v33 coloured by chain, front view.
PDB entry 6v33 coloured by chain, side view.
PDB entry 6v33 coloured by chain, top view.
Source organism: Pseudomonas congelans
Primary publication:
Misannotations of the genes encoding sugar N-formyltransferases.
Girardi NM, Thoden JB, Holden HM
Protein Sci 29 930-940 (2020)
PMID: 31867814

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-102539 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Methionyl-tRNA formyltransferase Chains: A, B
Molecule details ›
Chains: A, B
Length: 262 amino acids
Theoretical weight: 29.64 KDa
Source organism: Pseudomonas congelans
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A0N8R1B2 (Residues: 5-258; Coverage: 98%)
Gene name: ALO92_03534
Sequence domains:

Ligands and Environments

3 bound ligands:
Ligand 0FX 2 x 0FX
Ligand FOL 2 x FOL
Ligand EDO 2 x EDO
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-BM
Spacegroup: P3221
Unit cell:
a: 90.364Å b: 90.364Å c: 124.647Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.202 0.201 0.221
Expression system: Escherichia coli

Quick links

Citations

1 review citation

Functional characterization of prokaryotic dark matter: the road so far and what lies ahead.
Escudeiro et al. (2022)
1 other article

1 mention without citation

Misannotations of the genes encoding sugar N-formyltransferases.
Girardi et al. (2020)