6vax

X-ray diffraction
2.59Å resolution

Crystal structure of human SDHA-SDHAF2 assembly intermediate

Released:
Source organism: Homo sapiens

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-151898 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Chains: A, C
Molecule details ›
Chains: A, C
Length: 632 amino acids
Theoretical weight: 69.42 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli K-12
UniProt:
  • Canonical: P31040 (Residues: 44-664; Coverage: 94%)
Gene names: SDH2, SDHA, SDHF
Sequence domains:
Succinate dehydrogenase assembly factor 2, mitochondrial Chains: B, D
Molecule details ›
Chains: B, D
Length: 166 amino acids
Theoretical weight: 19.63 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli K-12
UniProt:
  • Canonical: Q9NX18 (Residues: 1-166; Coverage: 100%)
Gene names: C11orf79, PGL2, SDH5, SDHAF2
Sequence domains: Flavinator of succinate dehydrogenase

Ligands and Environments


Cofactor: Ligand FAD 2 x FAD
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 21-ID-F
Spacegroup: C2
Unit cell:
a: 210.558Å b: 68.782Å c: 126.578Å
α: 90° β: 93.16° γ: 90°
R-values:
R R work R free
0.202 0.199 0.249
Expression system: Escherichia coli K-12