› 6vc6

X-ray diffraction
2.13Å resolution

2.1 Angstrom Resolution Crystal Structure of 6-phospho-alpha-glucosidase from Gut Microorganisms in Complex with NAD and Mn2+

Released:
DOI: 10.2210/pdb6vc6/pdb
PDB entry 6vc6 coloured by chain, front view.
PDB entry 6vc6 coloured by chain, side view.
PDB entry 6vc6 coloured by chain, top view.
Source organism: Merdibacter massiliensis
Entry authors: Wu R, Kim Y, Endres M, Joachimiak J

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-167612 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
6-phospho-alpha-glucosidase Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 441 amino acids
Theoretical weight: 51.75 KDa
Source organism: Merdibacter massiliensis
Expression system: Escherichia coli BL21(DE3)

Ligands and Environments

4 bound ligands:
Ligand MN 4 x MN
Ligand G6P 4 x G6P
Ligand NAD 4 x NAD
Ligand GOL 3 x GOL
1 modified residue:
Ligand MSE 72 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: C2
Unit cell:
a: 194.46Å b: 62.257Å c: 160.706Å
α: 90° β: 90.35° γ: 90°
R-values:
R R work R free
0.198 0.196 0.229
Expression system: Escherichia coli BL21(DE3)

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