6vfr

X-ray diffraction
2.79Å resolution

Crystal structure of human protocadherin 18 EC1-EC4

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-190784 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (5 distinct):
Protocadherin-18 Chains: A, B
Molecule details ›
Chains: A, B
Length: 436 amino acids
Theoretical weight: 48.97 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
UniProt:
  • Canonical: Q9HCL0 (Residues: 28-457; Coverage: 39%)
Gene names: KIAA1562, PCDH18
Sequence domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA, FUC
Carbohydrate polymer : NEW Components: NAG, FUC
Carbohydrate polymer : NEW Components: NAG, FUC
Carbohydrate polymer : NEW Components: NAG, BMA, FUC, MAN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 24-ID-C
Spacegroup: C2
Unit cell:
a: 126.959Å b: 176.942Å c: 71.872Å
α: 90° β: 101.423° γ: 90°
R-values:
R R work R free
0.238 0.236 0.272
Expression system: Homo sapiens