› 6wfu

Electron Microscopy
3.03Å resolution

BatAAV-10HB - empty particles

Released:
DOI: 10.2210/pdb6wfu/pdb
PDB entry 6wfu coloured by chain, front view.
PDB entry 6wfu coloured by chain, side view.
PDB entry 6wfu coloured by chain, top view.
Source organism: Bat adeno-associated virus
Primary publication:
Structural characterization of a bat Adeno-associated virus capsid.
Mietzsch M, Li Y, Kurian J, Smith JK, Chipman P, McKenna R, Yang L, Agbandje-McKenna M
J Struct Biol 211 107547 (2020)
PMID: 32522552
Related structures: EMD-21657

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo 60-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-104590 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
VP1 capsid Chains: 1, 2, 3, 4, 5, 6, 7, 8, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, q, r, s, t, u, v, w, x, y, z
Molecule details ›
Chains: 1, 2, 3, 4, 5, 6, 7, 8, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, a, b, c, d, e, f, g, h, i, j, k, l, m, n, o, p, q, r, s, t, u, v, w, x, y, z
Length: 513 amino acids
Theoretical weight: 57.74 KDa
Source organism: Bat adeno-associated virus
Expression system: Homo sapiens
UniProt:
  • Canonical: A0A2Z4K548 (Residues: 209-721; Coverage: 71%)
Sequence domains: Parvovirus coat protein VP2

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.03Å
Relevant EMDB volumes: EMD-21657
Expression system: Homo sapiens

Quick links

Citations

1 review citation

Small but mighty: old and new parvoviruses of veterinary significance.
Jager et al. (2021)
7 other articles

2 mentions without citation

Cryo-electron Microscopy of Adeno-associated Virus.
Stagg et al. (2022)
1 more