› 6yeg

Hybrid

Hybrid structure of the SPP1 tail tube by solid-state NMR and cryo EM - Final EM Refinement

Released:
DOI: 10.2210/pdb6yeg/pdb
PDB entry 6yeg coloured by chain, front view.
PDB entry 6yeg coloured by chain, side view.
PDB entry 6yeg coloured by chain, top view.
Source organism: Bacillus phage SPP1
Primary publication:
Architecture of the flexible tail tube of bacteriophage SPP1.
Zinke M, Sachowsky KAA, Öster C, Zinn-Justin S, Ravelli R, Schröder GF, Habeck M, Lange A
Nat Commun 11 5759 (2020)
PMID: 33188213
Related structures: EMD-10792

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
homo dodecamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-129237 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Tail tube protein gp17.1* Chains: A, B, C, D, E, F, G, H, I, J, K, L
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I, J, K, L
Length: 180 amino acids
Theoretical weight: 19.67 KDa
Source organism: Bacillus phage SPP1
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: O48449 (Residues: 5-177; Coverage: 66%)
Gene name: 17.1
Sequence domains: Phage tail tube protein

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Experimental Method: Solid-state NMR, Electron Microscopy
Resolution: 4Å
Relevant EMDB volumes: EMD-10792
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

4 review citations

Major tail proteins of bacteriophages of the order Caudovirales.
Zinke et al. (2022)
3 more

4 mentions without citation

Architecture of the flexible tail tube of bacteriophage SPP1.
Zinke et al. (2020)
3 more