6zd0

Electron Microscopy
4.6Å resolution

Disulfide-locked early prepore intermedilysin-CD59

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
PDBe Complex ID:
PDB-CPX-146833 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Thiol-activated cytolysin Chains: A, C, E
Molecule details ›
Chains: A, C, E
Length: 535 amino acids
Theoretical weight: 59.1 KDa
Source organism: Streptococcus intermedius
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9LCB8 (Residues: 34-532; Coverage: 100%)
Gene name: ily
Sequence domains:
CD59 glycoprotein Chains: B, D, F
Molecule details ›
Chains: B, D, F
Length: 79 amino acids
Theoretical weight: 9.2 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P13987 (Residues: 26-102; Coverage: 75%)
Gene names: CD59, MIC11, MIN1, MIN2, MIN3, MSK21
Sequence domains: u-PAR/Ly-6 domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.6Å
Relevant EMDB volumes: EMD-11172
Expression systems:
  • Escherichia coli BL21(DE3)
  • Escherichia coli