› 6zl0

Electron Microscopy
40Å resolution

COPII on membranes, outer coat left-handed rod

Released:
DOI: 10.2210/pdb6zl0/pdb
PDB entry 6zl0 coloured by chain, front view.
PDB entry 6zl0 coloured by chain, side view.
PDB entry 6zl0 coloured by chain, top view.
Source organism: Saccharomyces cerevisiae S288C
Primary publication:
Structure of the complete, membrane-assembled COPII coat reveals a complex interaction network.
Hutchings J, Stancheva VG, Brown NR, Cheung ACM, Miller EA, Zanetti G
Nat Commun 12 2034 (2021)
PMID: 33795673
Related structures: EMD-11264

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-153785 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Protein transport protein SEC31 Chains: A, C
Molecule details ›
Chains: A, C
Length: 1273 amino acids
Theoretical weight: 138.85 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: P38968 (Residues: 1-1273; Coverage: 100%)
Gene names: D1229, SEC31, WEB1, YDL195W
Sequence domains:
Protein transport protein SEC13 Chains: B, D
Molecule details ›
Chains: B, D
Length: 297 amino acids
Theoretical weight: 33.08 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q04491 (Residues: 1-297; Coverage: 100%)
Gene names: ANU3, L8167.4, SEC13, YLR208W
Sequence domains: WD domain, G-beta repeat

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 40Å
Relevant EMDB volumes: EMD-11264
Expression system: Spodoptera frugiperda

Quick links

Citations

7 review citations

Current data processing strategies for cryo-electron tomography and subtomogram averaging.
Pyle et al. (2021)
6 more

1 mention without citation

Integrative modeling reveals the molecular architecture of the intraflagellar transport A (IFT-A) complex.
McCafferty et al. (2022)