› 6zvi

Electron Microscopy
3Å resolution

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
hetero 38-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-292781 (preferred)
Entry contents:
34 distinct polypeptide molecules
4 distinct RNA molecules
Macromolecules (38 distinct):
Small ribosomal subunit protein uS2A Chain: i
Molecule details ›
Chain: i
Length: 206 amino acids
Theoretical weight: 22.81 KDa
Source organism: Saccharomyces cerevisiae
UniProt:
  • Canonical: P32905 (Residues: 2-207; Coverage: 82%)
Gene names: NAB1, NAB1A, RPS0A, YGR214W, YST1
Sequence domains: Ribosomal protein S2
Small ribosomal subunit protein eS1A Chain: j
Molecule details ›
Chain: j
Length: 216 amino acids
Theoretical weight: 24.5 KDa
Source organism: Saccharomyces cerevisiae
UniProt:
  • Canonical: P33442 (Residues: 20-235; Coverage: 85%)
Gene names: L9753.9, PLC1, RPS10A, RPS1A, YLR441C
Sequence domains: Ribosomal S3Ae family
Small ribosomal subunit protein uS5 Chain: k
Small ribosomal subunit protein uS3 Chain: l
Small ribosomal subunit protein eS4A Chain: m
Small ribosomal subunit protein uS7 Chain: n
Small ribosomal subunit protein eS6A Chain: o
Small ribosomal subunit protein eS7A Chain: p
Small ribosomal subunit protein eS8A Chain: q
Small ribosomal subunit protein uS4A Chain: r
Small ribosomal subunit protein eS10A Chain: s
Small ribosomal subunit protein uS17A Chain: t
Small ribosomal subunit protein eS12 Chain: u
Small ribosomal subunit protein uS15 Chain: v
Small ribosomal subunit protein uS19 Chain: x
Small ribosomal subunit protein uS9A Chain: y
Small ribosomal subunit protein eS17A Chain: z
Small ribosomal subunit protein uS13A Chain: A
Small ribosomal subunit protein eS19A Chain: B
Small ribosomal subunit protein uS10 Chain: C
Small ribosomal subunit protein eS21A Chain: D
Small ribosomal subunit protein uS8A Chain: E
Small ribosomal subunit protein uS12A Chain: H
Small ribosomal subunit protein eS24A Chain: I
Small ribosomal subunit protein eS25A Chain: J
Small ribosomal subunit protein eS27A Chain: L
Small ribosomal subunit protein eS28A Chain: N
Small ribosomal subunit protein eS30A Chain: P
Small ribosomal subunit protein eS31 Chain: Q
Small ribosomal subunit protein RACK1 Chain: R
Multiprotein-bridging factor 1 Chain: T
Small ribosomal subunit protein uS14A Chain: O
Small ribosomal subunit protein uS11B Chain: w
Small ribosomal subunit protein eS26B Chain: K
A/P-site tRNA Chain: d
P/E-site tRNA Chain: e
Messenger RNA Chain: f
18S Ribosomal RNA Chain: h

Ligands and Environments

1 bound ligand:
Ligand ZN 2 x ZN
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this EM entry.
Resolution: 3Å
Relevant EMDB volumes: EMD-11457

Quick links

Citations

17 review citations

Translational control of stem cell function.
Saba et al. (2021)
16 more

2 mentions without citation

EDF1 coordinates cellular responses to ribosome collisions.
Sinha et al. (2020)
1 more