› 7a05

Solution NMR

NMR structure of D3-D4 domains of Vibrio vulnificus ribosomal protein S1

Released:
DOI: 10.2210/pdb7a05/pdb
PDB entry 7a05 coloured by chain, ensemble of 20 models, front view.
PDB entry 7a05 coloured by chain, ensemble of 20 models, side view.
PDB entry 7a05 coloured by chain, ensemble of 20 models, top view.
Source organism: Vibrio vulnificus
Primary publication:
NMR structure of the Vibrio vulnificus ribosomal protein S1 domains D3 and D4 provides insights into molecular recognition of single-stranded RNAs.
Qureshi NS, Matzel T, Cetiner EC, Schnieders R, Jonker HRA, Schwalbe H, Fürtig B
Nucleic Acids Res 49 7753-7764 (2021)
PMID: 34223902

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-104936 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
30S ribosomal protein S1 Chain: A
Molecule details ›
Chain: A
Length: 173 amino acids
Theoretical weight: 19.39 KDa
Source organism: Vibrio vulnificus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A3Q0L6Y6 (Residues: 187-356; Coverage: 31%)
Gene names: VV1_2982, rpsA
Sequence domains: S1 RNA binding domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 89%
Refinement method: simulated annealing with torsian angle dynamics
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

3 citation in other articles

Characterization of the Chimeric PriB-SSBc Protein.
Lin et al. (2021)
2 more

2 mentions without citation

NMR structure of the Vibrio vulnificus ribosomal protein S1 domains D3 and D4 provides insights into molecular recognition of single-stranded RNAs.
Qureshi et al. (2021)
1 more