› 7arz

X-ray diffraction
2.15Å resolution

Ternary complex of NAD-dependent formate dehydrogenase from Physcomitrium patens

Released:
DOI: 10.2210/pdb7arz/pdb
PDB entry 7arz coloured by chain, front view.
PDB entry 7arz coloured by chain, side view.
PDB entry 7arz coloured by chain, top view.
Source organism: Physcomitrium patens
Entry authors: Goryaynova DA, Nikolaeva AY, Pometun AA, Savin SS, Parshin PD, Popov VO, Tishkov VI, Boyko KM

Function and Biology Details

Reaction catalysed: 
Formate + NAD(+) = CO(2) + NADH
Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-109042 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Formate dehydrogenase, mitochondrial Chain: A
Molecule details ›
Chain: A
Length: 361 amino acids
Theoretical weight: 39.72 KDa
Source organism: Physcomitrium patens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A9SQZ2 (Residues: 43-402; Coverage: 90%)
Gene name: PHYPA_020821
Sequence domains:

Ligands and Environments

2 bound ligands:
Ligand NAD 1 x NAD
Ligand AZI 2 x AZI
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID29
Spacegroup: P3221
Unit cell:
a: 68.36Å b: 68.36Å c: 203.44Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.208 0.206 0.257
Expression system: Escherichia coli BL21(DE3)

Quick links