› 7bcp

X-ray diffraction
2Å resolution

Crystal structure of the sugar acid binding protein DctPAm from Advenella mimigardefordensis strain DPN7T in complex with gluconate

Released:
DOI: 10.2210/pdb7bcp/pdb
PDB entry 7bcp coloured by chain, front view.
PDB entry 7bcp coloured by chain, side view.
PDB entry 7bcp coloured by chain, top view.
Source organism: Advenella mimigardefordensis DPN7
Primary publication:
Crystal structure of the sugar acid-binding protein CxaP from a TRAP transporter in Advenella mimigardefordensis strain DPN7T.
Schäfer L, Meinert-Berning C, Kobus S, Höppner A, Smits SHJ, Steinbüchel A
FEBS J 288 4905-4917 (2021)
PMID: 33630388

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-195757 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Putative TRAP transporter solute receptor, DctP family Chain: A
Molecule details ›
Chain: A
Length: 339 amino acids
Theoretical weight: 37.02 KDa
Source organism: Advenella mimigardefordensis DPN7
Expression system: Escherichia coli
UniProt:
  • Canonical: R4JTF7 (Residues: 1-339; Coverage: 100%)
Gene name: MIM_c39430
Sequence domains: Bacterial extracellular solute-binding protein, family 7

Ligands and Environments

1 bound ligand:
Ligand GCO 1 x GCO
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID29
Spacegroup: P212121
Unit cell:
a: 57.931Å b: 62.312Å c: 98.193Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.179 0.177 0.231
Expression system: Escherichia coli

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Citations

1 mention without citation

Crystal structure of the sugar acid-binding protein CxaP from a TRAP transporter in Advenella mimigardefordensis strain DPN7T.
Schäfer et al. (2021)