› 7bnp

X-ray diffraction
1.7Å resolution

Llama nanobody nb17 raised against GldL from Flavobacterium jonhsoniae

Released:
DOI: 10.2210/pdb7bnp/pdb
PDB entry 7bnp coloured by chain, front view.
PDB entry 7bnp coloured by chain, side view.
PDB entry 7bnp coloured by chain, top view.
Source organism: Lama glama
Primary publication:
Crystal structures of two camelid nanobodies raised against GldL, a component of the type IX secretion system from Flavobacterium johnsoniae.
Trinh TTN, Gaubert A, Melani P, Cambillau C, Roussel A, Leone P
Acta Crystallogr F Struct Biol Commun 77 171-176 (2021)
PMID: 34100775

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assemblies composition:
monomeric (preferred)
homo dimer
Assembly name:
PDBe Complex ID:
PDB-CPX-214320 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
nanobody nb17 Chain: A
Molecule details ›
Chain: A
Length: 130 amino acids
Theoretical weight: 14.2 KDa
Source organism: Lama glama
Expression system: Escherichia coli BL21(DE3)

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SOLEIL BEAMLINE PROXIMA 1
Spacegroup: C2
Unit cell:
a: 42.706Å b: 45.471Å c: 58.1Å
α: 90° β: 108.88° γ: 90°
R-values:
R R work R free
0.214 0.213 0.226
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

1 citations in other articles

Structural and thermodynamic insights into antibody light chain tetramer formation through 3D domain swapping.
Sakai et al. (2023)

1 mention without citation

Crystal structures of two camelid nanobodies raised against GldL, a component of the type IX secretion system from Flavobacterium johnsoniae.
Trinh et al. (2021)