› 7bpc

X-ray diffraction
2.45Å resolution

Crystal structure of 2, 3-dihydroxybenzoic acid decarboxylase from Fusarium oxysporum in complex with 2,5-DHBA

Released:
DOI: 10.2210/pdb7bpc/pdb
PDB entry 7bpc coloured by chain, front view.
PDB entry 7bpc coloured by chain, side view.
PDB entry 7bpc coloured by chain, top view.
Source organism: Fusarium oxysporum
Primary publication:
2,3-Dihydroxybenzoic Acid Decarboxylase from Fusarium oxysporum: Crystal Structures and Substrate Recognition Mechanism.
Song M, Zhang X, Liu W, Feng J, Cui Y, Yao P, Wang M, Guo RT, Wu Q, Zhu D
Chembiochem 21 2950-2956 (2020)
PMID: 32421914

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-126101 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Amidohydrolase-related domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 343 amino acids
Theoretical weight: 39.29 KDa
Source organism: Fusarium oxysporum
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: N1S495 (Residues: 1-336; Coverage: 100%)
Gene name: FOC4_g10002133
Sequence domains: Amidohydrolase

Ligands and Environments

2 bound ligands:
Ligand GTQ 3 x GTQ
Ligand ZN 2 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17B1
Spacegroup: P212121
Unit cell:
a: 76.769Å b: 129.739Å c: 140.557Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.196 0.193 0.247
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

3 review citations

Bright Side of Fusarium oxysporum: Secondary Metabolites Bioactivities and Industrial Relevance in Biotechnology and Nanotechnology.
Ibrahim et al. (2021)
2 more