› 7f0h

X-ray diffraction
1.7Å resolution

Structural and functional characterization of bovine G1P[5] rotavirus VP8* protein

Released:
DOI: 10.2210/pdb7f0h/pdb
PDB entry 7f0h coloured by chain, front view.
PDB entry 7f0h coloured by chain, side view.
PDB entry 7f0h coloured by chain, top view.
Source organism: Rotavirus A
Primary publication:
Structural and functional characterization of bovine G1P[5] rotavirus VP8* protein.
Dang L, Su Y, Qi J, Wu Z, Li D, Wang M, Zhang Q, Wang H, Bai R, Duan Z, Sun X
Virology 563 116-125 (2021)
PMID: 34509703

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-185003 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Outer capsid protein VP8* Chains: A, B
Molecule details ›
Chains: A, B
Length: 161 amino acids
Theoretical weight: 18.09 KDa
Source organism: Rotavirus A
Expression system: Escherichia phage Ecwhy_1
UniProt:
  • Canonical: Q8JNB4 (Residues: 64-224; Coverage: 21%)
Sequence domains: Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL17U
Spacegroup: I212121
Unit cell:
a: 97.753Å b: 102.364Å c: 137.722Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.168 0.167 0.188
Expression system: Escherichia phage Ecwhy_1

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