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› 7f0n

X-ray diffraction
1.6Å resolution

Structure of deamidated Ubiquitin

Released:
DOI: 10.2210/pdb7f0n/pdb
Model geometry
Fit model/data
PDB entry 7f0n coloured by chain, front view.
PDB entry 7f0n coloured by chain, side view.
PDB entry 7f0n coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Chauhan K, Varshney N, Das R

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-158821 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Ubiquitin Chain: A
Molecule details ›
Chain: A
Length: 76 amino acids
Theoretical weight: 8.58 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P62979 (Residues: 1-76; Coverage: 49%)
Gene names: RPS27A, UBA80, UBCEP1
Sequence domains: Ubiquitin family

Ligands and Environments

3 bound ligands:
Ligand NA 10 x NA
Ligand K 1 x K
Ligand MG 1 x MG
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: RIGAKU FR-X
Spacegroup: C2
Unit cell:
a: 48.01Å b: 39.06Å c: 35.29Å
α: 90° β: 93.12° γ: 90°
R-values:
R R work R free
0.138 0.136 0.182
Expression system: Escherichia coli

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