7fff

Electron Microscopy
3Å resolution

Structure of Venezuelan equine encephalitis virus with the receptor LDLRAD3

Released:

Function and Biology Details

Reaction catalysed:
Autocatalytic release of the core protein from the N-terminus of the togavirus structural polyprotein by hydrolysis of a -Trp-|-Ser- bond.
Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
hetero icosamer (preferred)
PDBe Complex ID:
PDB-CPX-138742 (preferred)
Entry contents:
5 distinct polypeptide molecules
Macromolecules (5 distinct):
Capsid protein Chains: A, F, K, S
Molecule details ›
Chains: A, F, K, S
Length: 275 amino acids
Theoretical weight: 30.98 KDa
Source organism: Venezuelan equine encephalitis virus (strain TC-83)
Expression system: Homo sapiens
UniProt:
  • Canonical: P05674 (Residues: 1-275; Coverage: 22%)
Sequence domains: Alphavirus core protein
Spike glycoprotein E1 Chains: B, C, G, O
Molecule details ›
Chains: B, C, G, O
Length: 442 amino acids
Theoretical weight: 47.95 KDa
Source organism: Venezuelan equine encephalitis virus (strain TC-83)
Expression system: Homo sapiens
UniProt:
  • Canonical: P05674 (Residues: 813-1254; Coverage: 35%)
Sequence domains: Alphavirus E1 glycoprotein
Low-density lipoprotein receptor class A domain-containing protein 3 Chains: D, E, H, M
Assembly protein E3 Chains: I, L, P, T
Spike glycoprotein E2 Chains: J, N, Q, R

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this EM entry.
Resolution:
Relevant EMDB volumes: EMD-31567
Expression system: Homo sapiens