7fsr

X-ray diffraction
2.29Å resolution

SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z54615640

Released:
Source organism: Homo sapiens
Entry authors: Bradshaw WJ, Katis VL, Bountra C, von Delft F, Brennan PE

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-126342 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Syntenin-1 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 195 amino acids
Theoretical weight: 21.43 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: O00560 (Residues: 106-298; Coverage: 65%)
Gene names: MDA9, SDCBP, SYCL
Sequence domains: PDZ domain

Ligands and Environments

No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: DIAMOND BEAMLINE I04-1
Spacegroup: P21
Unit cell:
a: 80.965Å b: 49.493Å c: 114.06Å
α: 90° β: 95.37° γ: 90°
R-values:
R R work R free
0.21 0.207 0.276
Expression system: Escherichia coli