PDB 7nwi structure summary ‹ Protein Data Bank in Europe (PDBe)

Function and Biology Details

Reaction catalysed:

The C-O-P bond 3' to the apurinic or apyrimidinic site in DNA is broken by a beta-elimination reaction, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate

Biochemical function:

structural constituent of ribosome

Biological process:

translation

Cellular component:

ribosome

Sequence domains:

270 more domains

Structure analysis Details

Assembly composition:

hetero 84-mer (preferred)

PDBe Complex ID:

PDB-CPX-242931 (preferred)

Entry contents:

78 distinct polypeptide molecules
6 distinct RNA molecules

Macromolecules (84 distinct):

Large ribosomal subunit protein uL2 Chain: A

Molecule details ›

Chain: A
Length: 244 amino acids
Theoretical weight: 26.57 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TT27 (Residues: 2-245; Coverage: 95%)

Gene name: RPL8
Sequence domains:

Large ribosomal subunit protein uL3 Chain: B

Molecule details ›

Chain: B
Length: 403 amino acids
Theoretical weight: 46.11 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TL06 (Residues: 1-403; Coverage: 100%)

Gene name: RPL3
Sequence domains: Ribosomal protein L3

60S ribosomal protein L4 Chain: C

Molecule details ›

Chain: C
Length: 425 amino acids
Theoretical weight: 47.73 KDa
Source organism: Oryctolagus cuniculus

Large ribosomal subunit protein uL18 Chain: D

Molecule details ›

Chain: D
Length: 297 amino acids
Theoretical weight: 34.48 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: P19949 (Residues: 1-297; Coverage: 100%)

Gene name: RPL5

Large ribosomal subunit protein eL6 Chain: E

Molecule details ›

Chain: E
Length: 291 amino acids
Theoretical weight: 33.06 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SKF7 (Residues: 1-291; Coverage: 100%)

Gene name: RPL6
Sequence domains:

Large ribosomal subunit protein uL30 Chain: F

Molecule details ›

Chain: F
Length: 249 amino acids
Theoretical weight: 29.52 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SV32 (Residues: 1-208; Coverage: 100%)

Gene name: RPL7
Sequence domains:

Large ribosomal subunit protein eL8 Chain: G

Molecule details ›

Chain: G
Length: 241 amino acids
Theoretical weight: 27.48 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1STW0 (Residues: 79-319; Coverage: 76%)

Gene name: RPL7A
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family

Large ribosomal subunit protein uL6 Chain: H

Molecule details ›

Chain: H
Length: 190 amino acids
Theoretical weight: 21.63 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SWI6 (Residues: 1-190; Coverage: 99%)

Gene name: RPL9
Sequence domains: Ribosomal protein L6

Large ribosomal subunit protein uL16 Chain: I

Molecule details ›

Chain: I
Length: 214 amino acids
Theoretical weight: 24.64 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: B7NZQ2 (Residues: 1-214; Coverage: 100%)

Gene name: RPL10
Sequence domains: Ribosomal protein L16p/L10e

Ribosomal protein L11 Chain: J

Molecule details ›

Chain: J
Length: 181 amino acids
Theoretical weight: 20.67 KDa
Source organism: Oryctolagus cuniculus

Large ribosomal subunit protein eL13 Chain: L

Molecule details ›

Chain: L
Length: 211 amino acids
Theoretical weight: 24.35 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TKB3 (Residues: 1-211; Coverage: 100%)

Gene name: RPL13
Sequence domains: Ribosomal protein L13e

Large ribosomal subunit protein eL14 Chain: M

Molecule details ›

Chain: M
Length: 218 amino acids
Theoretical weight: 23.87 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SZ12 (Residues: 1-218; Coverage: 100%)

Gene name: RPL14
Sequence domains: Ribosomal protein L14

Large ribosomal subunit protein eL15 Chain: N

Molecule details ›

Chain: N
Length: 203 amino acids
Theoretical weight: 24.08 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1T0C1 (Residues: 2-204; Coverage: 100%)

Gene name: RPL15
Sequence domains: Ribosomal L15

L13a Chain: O

Molecule details ›

Chain: O
Length: 199 amino acids
Theoretical weight: 23.25 KDa
Source organism: Oryctolagus cuniculus

L17 Chain: P

Molecule details ›

Chain: P
Length: 153 amino acids
Theoretical weight: 17.76 KDa
Source organism: Oryctolagus cuniculus

Large ribosomal subunit protein uL15/eL18 domain-containing protein Chain: Q

Molecule details ›

Chain: Q
Length: 188 amino acids
Theoretical weight: 21.59 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: F6QKI9 (Residues: 1-188; Coverage: 100%)

Gene name: RPL18
Sequence domains: Ribosomal protein 60S L18 and 50S L18e

Large ribosomal subunit protein eL19 Chain: R

Molecule details ›

Chain: R
Length: 196 amino acids
Theoretical weight: 23.54 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: Q3T0W9 (Residues: 1-196; Coverage: 100%)

Gene name: RPL19
Sequence domains: Ribosomal protein L19e

L18a Chain: S

Molecule details ›

Chain: S
Length: 175 amino acids
Theoretical weight: 20.7 KDa
Source organism: Oryctolagus cuniculus

Large ribosomal subunit protein eL21 Chain: T

Molecule details ›

Chain: T
Length: 159 amino acids
Theoretical weight: 18.48 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SHQ2 (Residues: 2-160; Coverage: 99%)

Gene name: RPL21
Sequence domains: Ribosomal protein L21e

Large ribosomal subunit protein eL22 Chain: U

Molecule details ›

Chain: U
Length: 128 amino acids
Theoretical weight: 14.78 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: Q4R5I3 (Residues: 1-128; Coverage: 100%)

Gene names: QflA-13079, RPL22
Sequence domains: Ribosomal L22e protein family

Large ribosomal subunit protein uL14 Chain: V

Molecule details ›

Chain: V
Length: 131 amino acids
Theoretical weight: 13.97 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1T6D1 (Residues: 10-140; Coverage: 94%)

Gene name: RPL23
Sequence domains: Ribosomal protein L14p/L23e

Large ribosomal subunit protein eL24 Chain: W

Molecule details ›

Chain: W
Length: 134 amino acids
Theoretical weight: 15.54 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: A0A061I3X8 (Residues: 1-134; Coverage: 100%)

Gene name: H671_4g12624
Sequence domains: Ribosomal protein L24e

Large ribosomal subunit protein uL23 Chain: X

Molecule details ›

Chain: X
Length: 156 amino acids
Theoretical weight: 17.77 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SE76 (Residues: 1-156; Coverage: 100%)

Gene name: RPL23A
Sequence domains:

Large ribosomal subunit protein uL24 Chain: Y

Molecule details ›

Chain: Y
Length: 134 amino acids
Theoretical weight: 15.89 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SQH0 (Residues: 1-134; Coverage: 92%)

Gene name: RPL26
Sequence domains:

Large ribosomal subunit protein eL27 Chain: Z

Molecule details ›

Chain: Z
Length: 135 amino acids
Theoretical weight: 15.7 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TXF6 (Residues: 2-136; Coverage: 99%)

Gene name: RPL27
Sequence domains:

uL15 Chain: a

Molecule details ›

Chain: a
Length: 160 amino acids
Theoretical weight: 17.83 KDa
Source organism: Oryctolagus cuniculus

60S ribosomal protein L29 Chain: b

Molecule details ›

Chain: b
Length: 245 amino acids
Theoretical weight: 26.71 KDa
Source organism: Oryctolagus cuniculus

Large ribosomal subunit protein eL30 Chain: c

Molecule details ›

Chain: c
Length: 115 amino acids
Theoretical weight: 12.81 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TDL2 (Residues: 1-115; Coverage: 100%)

Gene name: RPL30
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family

Large ribosomal subunit protein eL31 Chain: d

Molecule details ›

Chain: d
Length: 107 amino acids
Theoretical weight: 12.64 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SHG0 (Residues: 18-124; Coverage: 86%)

Gene name: RPL31
Sequence domains: Ribosomal protein L31e

Large ribosomal subunit protein eL32 Chain: e

Molecule details ›

Chain: e
Length: 128 amino acids
Theoretical weight: 15.02 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TUN8 (Residues: 2-129; Coverage: 95%)

Gene name: RPL32
Sequence domains: Ribosomal protein L32

Large ribosomal subunit protein eL33 Chain: f

Molecule details ›

Chain: f
Length: 109 amino acids
Theoretical weight: 12.45 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SF08 (Residues: 2-110; Coverage: 99%)

Gene name: RPL35A
Sequence domains: Ribosomal protein L35Ae

Large ribosomal subunit protein eL34 Chain: g

Molecule details ›

Chain: g
Length: 126 amino acids
Theoretical weight: 14.21 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TXG5 (Residues: 1-116; Coverage: 99%)

Gene name: RPL34
Sequence domains: Ribosomal protein L34e

Large ribosomal subunit protein uL29 Chain: h

Molecule details ›

Chain: h
Length: 122 amino acids
Theoretical weight: 14.44 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SIT5 (Residues: 2-123; Coverage: 99%)

Gene name: RPL35
Sequence domains: Ribosomal L29 protein

60S ribosomal protein L36 Chain: i

Molecule details ›

Chain: i
Length: 117 amino acids
Theoretical weight: 13.55 KDa
Source organism: Oryctolagus cuniculus

Large ribosomal subunit protein eL37 Chain: j

Molecule details ›

Chain: j
Length: 97 amino acids
Theoretical weight: 11.11 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: U3KPD5 (Residues: 1-97; Coverage: 100%)

Gene name: RPL37
Sequence domains: Ribosomal protein L37e

L38 Chain: k

Molecule details ›

Chain: k
Length: 69 amino acids
Theoretical weight: 8.11 KDa
Source organism: Oryctolagus cuniculus

Large ribosomal subunit protein eL39 Chain: l

Molecule details ›

Chain: l
Length: 50 amino acids
Theoretical weight: 6.3 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SYU7 (Residues: 2-51; Coverage: 98%)

Gene name: RPL39
Sequence domains: Ribosomal L39 protein

60S ribosomal protein L40 Chain: m

Molecule details ›

Chain: m
Length: 128 amino acids
Theoretical weight: 14.7 KDa
Source organism: Oryctolagus cuniculus

Small ribosomal subunit protein eS32 Chain: n

Molecule details ›

Chain: n
Length: 23 amino acids
Theoretical weight: 3.21 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: A0A087WNH4 (Residues: 2-24; Coverage: 92%)

Gene name: RPL41
Sequence domains: Ribosomal protein L41

Large ribosomal subunit protein eL42 Chain: o

Molecule details ›

Chain: o
Length: 142 amino acids
Theoretical weight: 16.17 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: A0A6P5P305 (Residues: 1-142; Coverage: 100%)

Gene name: Rpl36a
Sequence domains: Ribosomal protein L44

Large ribosomal subunit protein eL43 Chain: p

Molecule details ›

Chain: p
Length: 91 amino acids
Theoretical weight: 10.17 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SY53 (Residues: 2-92; Coverage: 99%)

Gene name: RPL37A
Sequence domains: Ribosomal L37ae protein family

Large ribosomal subunit protein eL28 Chain: r

Molecule details ›

Chain: r
Length: 137 amino acids
Theoretical weight: 15.78 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1U7L1 (Residues: 1-137; Coverage: 100%)

Gene name: RPL28
Sequence domains: Ribosomal L28e protein family

Large ribosomal subunit protein uL10 Chain: s

Molecule details ›

Chain: s
Length: 318 amino acids
Theoretical weight: 34.38 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SPK4 (Residues: 1-318; Coverage: 100%)

Gene name: RPLP0
Sequence domains:

Large ribosomal subunit protein uL11 Chain: t

Molecule details ›

Chain: t
Length: 163 amino acids
Theoretical weight: 17.69 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SMR7 (Residues: 1-163; Coverage: 99%)

Gene name: RPL12
Sequence domains:

Small ribosomal subunit protein uS2 Chain: AA

Molecule details ›

Chain: AA
Length: 295 amino acids
Theoretical weight: 32.93 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TLT8 (Residues: 1-295; Coverage: 100%)

Gene name: RPSA
Sequence domains:

Small ribosomal subunit protein eS1 Chain: BB

Molecule details ›

Chain: BB
Length: 264 amino acids
Theoretical weight: 29.94 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: P97351 (Residues: 1-264; Coverage: 100%)

Gene names: Rps3a, Rps3a1
Sequence domains: Ribosomal S3Ae family

Small ribosomal subunit protein uS5 Chain: CC

Molecule details ›

Chain: CC
Length: 259 amino acids
Theoretical weight: 27.96 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: O55214 (Residues: 1-259; Coverage: 100%)

Sequence domains:

Small ribosomal subunit protein uS3 Chain: DD

Molecule details ›

Chain: DD
Length: 281 amino acids
Theoretical weight: 31.15 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TNM3 (Residues: 1-243; Coverage: 100%)

Gene name: RPS3
Sequence domains:

S4 Chain: EE

Molecule details ›

Chain: EE
Length: 262 amino acids
Theoretical weight: 29.5 KDa
Source organism: Oryctolagus cuniculus

Small ribosomal subunit protein uS7 Chain: FF

Molecule details ›

Chain: FF
Length: 205 amino acids
Theoretical weight: 23.04 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TFM5 (Residues: 1-204; Coverage: 100%)

Gene name: RPS5
Sequence domains: Ribosomal protein S7p/S5e

Small ribosomal subunit protein eS6 Chain: GG

Molecule details ›

Chain: GG
Length: 262 amino acids
Theoretical weight: 30.07 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: A0A6G1APX9 (Residues: 1-262; Coverage: 100%)

Gene names: FOF47_R08726, Rps6_1
Sequence domains: Ribosomal protein S6e

Small ribosomal subunit protein eS7 Chain: HH

Molecule details ›

Chain: HH
Length: 190 amino acids
Theoretical weight: 21.72 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SVB0 (Residues: 5-194; Coverage: 98%)

Gene name: RPS7

Small ribosomal subunit protein eS8 Chain: II

Molecule details ›

Chain: II
Length: 206 amino acids
Theoretical weight: 24 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TJW1 (Residues: 2-207; Coverage: 99%)

Gene name: RPS8
Sequence domains: Ribosomal protein S8e

Small ribosomal subunit protein uS4 Chain: JJ

Molecule details ›

Chain: JJ
Length: 194 amino acids
Theoretical weight: 22.66 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: A0A1S3APZ1 (Residues: 1-194; Coverage: 100%)

Gene name: RPS9
Sequence domains:

Small ribosomal subunit protein eS10 Chain: KK

Molecule details ›

Chain: KK
Length: 98 amino acids
Theoretical weight: 11.77 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1T168 (Residues: 1-98; Coverage: 59%)

Gene name: RPS10
Sequence domains: Plectin/S10 domain

Small ribosomal subunit protein uS17 Chain: LL

Molecule details ›

Chain: LL
Length: 158 amino acids
Theoretical weight: 18.47 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TRM4 (Residues: 1-158; Coverage: 100%)

Gene name: RPS11
Sequence domains:

Small ribosomal subunit protein eS12 Chain: MM

Molecule details ›

Chain: MM
Length: 124 amino acids
Theoretical weight: 13.77 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SFR8 (Residues: 9-132; Coverage: 94%)

Gene name: RPS12
Sequence domains: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family

Small ribosomal subunit protein uS15 Chain: NN

Molecule details ›

Chain: NN
Length: 150 amino acids
Theoretical weight: 17.13 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SP51 (Residues: 2-151; Coverage: 99%)

Gene name: RPS13
Sequence domains:

S14 Chain: OO

Molecule details ›

Chain: OO
Length: 168 amino acids
Theoretical weight: 18.13 KDa
Source organism: Oryctolagus cuniculus

Small ribosomal subunit protein uS19 Chain: PP

Molecule details ›

Chain: PP
Length: 145 amino acids
Theoretical weight: 17.05 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1U0Q2 (Residues: 1-145; Coverage: 100%)

Gene name: RPS15
Sequence domains: Ribosomal protein S19

40S ribosomal protein S16 Chain: QQ

Molecule details ›

Chain: QQ
Length: 157 amino acids
Theoretical weight: 17.59 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: Q5CZY9 (Residues: 16-172; Coverage: 91%)

Gene names: Gm10079, Rps16
Sequence domains: Ribosomal protein S9/S16

Small ribosomal subunit protein eS17 Chain: RR

Molecule details ›

Chain: RR
Length: 129 amino acids
Theoretical weight: 14.97 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TU13 (Residues: 1-129; Coverage: 96%)

Gene name: RPS17
Sequence domains: Ribosomal S17

Small ribosomal subunit protein uS13 Chain: SS

Molecule details ›

Chain: SS
Length: 137 amino acids
Theoretical weight: 16.17 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TPG3 (Residues: 6-142; Coverage: 90%)

Gene name: RPS18
Sequence domains: Ribosomal protein S13/S18

S19 Chain: TT

Molecule details ›

Chain: TT
Length: 141 amino acids
Theoretical weight: 15.68 KDa
Source organism: Oryctolagus cuniculus

Small ribosomal subunit protein uS10 Chain: UU

Molecule details ›

Chain: UU
Length: 104 amino acids
Theoretical weight: 11.77 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: A0A5F9CX53 (Residues: 16-119; Coverage: 87%)

Sequence domains: Ribosomal protein S10p/S20e

S21 Chain: VV

Molecule details ›

Chain: VV
Length: 83 amino acids
Theoretical weight: 9.12 KDa
Source organism: Oryctolagus cuniculus

Ribosomal protein S15a Chain: WW

Molecule details ›

Chain: WW
Length: 139 amino acids
Theoretical weight: 15.78 KDa
Source organism: Oryctolagus cuniculus

Small ribosomal subunit protein uS12 Chain: XX

Molecule details ›

Chain: XX
Length: 141 amino acids
Theoretical weight: 15.63 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SZ47 (Residues: 2-142; Coverage: 99%)

Gene name: RPS23
Sequence domains: Ribosomal protein S12/S23

40S ribosomal protein S24 Chain: YY

Molecule details ›

Chain: YY
Length: 146 amino acids
Theoretical weight: 17.01 KDa
Source organism: Oryctolagus cuniculus

Small ribosomal subunit protein eS25 Chain: ZZ

Molecule details ›

Chain: ZZ
Length: 123 amino acids
Theoretical weight: 13.58 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TDB3 (Residues: 3-124; Coverage: 98%)

Gene name: RPS25
Sequence domains: S25 ribosomal protein

40S ribosomal protein S26 Chain: aa

Molecule details ›

Chain: aa
Length: 117 amino acids
Theoretical weight: 13.15 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: T0M5X4 (Residues: 1-117; Coverage: 100%)

Gene name: CB1_000449017
Sequence domains: Ribosomal protein S26e

Small ribosomal subunit protein eS27 Chain: bb

Molecule details ›

Chain: bb
Length: 84 amino acids
Theoretical weight: 9.48 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TZ76 (Residues: 1-84; Coverage: 100%)

Gene name: RPS27
Sequence domains: Ribosomal protein S27

Small ribosomal subunit protein eS28 Chain: cc

Molecule details ›

Chain: cc
Length: 69 amino acids
Theoretical weight: 7.78 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1TIB4 (Residues: 1-69; Coverage: 100%)

Gene name: RPS28
Sequence domains: Ribosomal protein S28e

Small ribosomal subunit protein uS14 Chain: dd

Molecule details ›

Chain: dd
Length: 53 amino acids
Theoretical weight: 6.36 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1U7M4 (Residues: 4-56; Coverage: 95%)

Gene name: RPS29
Sequence domains: Ribosomal protein S14p/S29e

Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein Chain: ee

Molecule details ›

Chain: ee
Length: 133 amino acids
Theoretical weight: 14.5 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1T8A2 (Residues: 1-133; Coverage: 100%)

Gene name: FAU
Sequence domains:

S27a Chain: ff

Molecule details ›

Chain: ff
Length: 62 amino acids
Theoretical weight: 7.47 KDa
Source organism: Oryctolagus cuniculus

Small ribosomal subunit protein RACK1 Chain: gg

Molecule details ›

Chain: gg
Length: 313 amino acids
Theoretical weight: 34.67 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: G1SJB4 (Residues: 2-314; Coverage: 99%)

Gene name: RACK1
Sequence domains: WD domain, G-beta repeat

Sec61Beta Chain: 1

Molecule details ›

Chain: 1
Length: 15 amino acids
Theoretical weight: 1.79 KDa
Source organism: Oryctolagus cuniculus

P-Site tRNA Chain: 2

Molecule details ›

Chain: 2
Length: 76 nucleotides
Theoretical weight: 24.44 KDa
Sequence domains: tRNA

28S ribosomal RNA+BlaS Chain: 5

Molecule details ›

Chain: 5
Length: 3788 nucleotides
Theoretical weight: 1226.74 KDa
Sequence domains: Eukaryotic large subunit ribosomal RNA

5S ribosomal RNA Chain: 7

Molecule details ›

Chain: 7
Length: 120 nucleotides
Theoretical weight: 38.69 KDa
Sequence domains: 5S ribosomal RNA

5.8S ribosomal RNA Chain: 8

Molecule details ›

Chain: 8
Length: 156 nucleotides
Theoretical weight: 50.14 KDa
Sequence domains: 5.8S ribosomal RNA

18S Ribosomal RNA Chain: 9

Molecule details ›

Chain: 9
Length: 1777 nucleotides
Theoretical weight: 573.22 KDa
Sequence domains: Eukaryotic small subunit ribosomal RNA

Messenger RNA Chain: K

Molecule details ›

Chain: K
Length: 10 nucleotides
Theoretical weight: 3.23 KDa

Ligands and Environments

3 bound ligands:

No modified residues

Experiments and Validation Details

Resolution: 3.13Å

Relevant EMDB volumes: EMD-12633

Protein Data Bank in Europe

Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S

Function and Biology Details

Structure analysis Details

Ligands and Environments

Experiments and Validation Details

Quick links

Citations

1 review citation

3 mentions without citation

PDBe › 7nwi

Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S

Function and Biology Details

Structure analysis Details

Ligands and Environments

Experiments and Validation Details

Quick links

Citations

1 review citation

3 mentions without citation